BIF401 Assignment 1 Fall 2021 – Assignments – Solution VU
Assignment # 01 (Total Marks: 20)
Fall 2021
Due Date: 12th December2021
Instructions to be followed:
- Your assignment should be submitted as MS Word/Pdf document
- There is a Zero-Tolerance policy for plagiarism. Strict action will be taken in this regard.
- Submit your assignment on VU LMS Portal within the given time frame. Email assignments will not be
Question # 1:
Part (a) – (2.5 Marks) [Word Limit: 200]
Which types of issues/problems related to biological data are dealt with the “Bioinformatics”?
Part (b) – (2.5 Marks)
Which alignment method is most suited to align closely related sequences? Explain in detail (Hint: Lesson # 32 – 48)
Question # 2: (10 Marks)
Find the best global alignment, and its corresponding score between the sequences,
Sequence γ = CAATAC and Sequence β = TCGTC. Use a match score of 5, a mismatch score of -5 and a gap penalty of -5. Show your work and fill the given Matrix.
(Hint: Lesson # 35 – 40)
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